论文标题
将H&E污渍基于深度学习的转化为特殊污渍
Deep learning-based transformation of the H&E stain into special stains
论文作者
论文摘要
病理学是通过视觉检查组织化学染色的幻灯片来实施的。最常见的是,苏木精和曙红(H&E)染色用于诊断工作流程,是癌症诊断的黄金标准。但是,在许多情况下,尤其是对于非塑性疾病,其他“特殊污渍”用于为组织成分提供不同水平的对比度和颜色,并允许病理学家获得更清晰的诊断情况。在这项研究中,我们使用肾针核活检的组织切片证明了从H&E到不同的特殊污渍(Masson的三色,周期性酸 - 奇奇和琼斯银染)的效用。基于三位肾脏病理学家的评估,然后由第四个肾脏病理学家进行裁决,我们表明,现有H&E图像的虚拟特殊污渍产生改善了从58位独特受试者采样的几种非肿瘤性肾脏疾病的诊断。三位病理学家进行的第二项研究发现,染色转换网络产生的特殊污渍的质量在统计学上等同于通过标准组织化学染色产生的质量。由于可以在每个患者核心标本幻灯片的1分钟内将H&E图像转化为特殊污渍,因此,当需要其他特殊污渍以及大量节省的时间和成本,减轻了医疗保健系统和患者的负担,这种污渍到染色的转化框架可以提高初步诊断的质量。
Pathology is practiced by visual inspection of histochemically stained slides. Most commonly, the hematoxylin and eosin (H&E) stain is used in the diagnostic workflow and it is the gold standard for cancer diagnosis. However, in many cases, especially for non-neoplastic diseases, additional "special stains" are used to provide different levels of contrast and color to tissue components and allow pathologists to get a clearer diagnostic picture. In this study, we demonstrate the utility of supervised learning-based computational stain transformation from H&E to different special stains (Masson's Trichrome, periodic acid-Schiff and Jones silver stain) using tissue sections from kidney needle core biopsies. Based on evaluation by three renal pathologists, followed by adjudication by a fourth renal pathologist, we show that the generation of virtual special stains from existing H&E images improves the diagnosis in several non-neoplastic kidney diseases sampled from 58 unique subjects. A second study performed by three pathologists found that the quality of the special stains generated by the stain transformation network was statistically equivalent to those generated through standard histochemical staining. As the transformation of H&E images into special stains can be achieved within 1 min or less per patient core specimen slide, this stain-to-stain transformation framework can improve the quality of the preliminary diagnosis when additional special stains are needed, along with significant savings in time and cost, reducing the burden on healthcare system and patients.